Table 2 Random samples of 50 3’UTRs having an AATAAA PAS at one of five bp distances were manually checked to confirm the AATAAA and count if the PAS was within a repeat or not (other)
From: SINE retrotransposons import polyadenylation signals to 3’UTRs in dog (Canis familiaris)
AATAAA Identified at (bp) | |||||
|---|---|---|---|---|---|
22 | 24 | 28 | 32 | 36 | |
Can-SINE | 0 (0) | 7 (4) | 4 (3) | 31 (31) | 6 (6) |
LINE | 3 (0) | 4 (0) | 2 (2) | 0 (0) | 5 (5) |
MIR | 0 (0) | 0 (0) | 0 (0) | 0 (0) | 1 (1) |
Other | 47 (0) | 39 (1) | 44 (7) | 19 (3) | 38 (38) |