Fig. 1

Object of the study and workflow. A Hieracium alpinum, whole plant and inflorescence. (Photos by Begoña Quirós de la Peña). B Chromosomal position of the HintCl-18 satDNA element determined by FISH (chromosomes and interphase nucleus). A comparison of the positions of the primary constriction (centromere) and block of HintCl-18 on the same chromosome is shown in Box (1). The blue fluorescence represents DAPI staining, and the red fluorescence represents the HintCl-18 probe. The scale bar represents 5 μm. C Graphical representation of the HintCl-18 satDNA family monomer as a sequence logo. D Workflow for comparative analysis of the p- and g-subsets of the ONT library. E Workflow for reconstructing complete transposable elements from their parts